Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPN1P18031 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.96■□□□□ 0.79
PTPN1P18031 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 AC009947.2-201ENST00000444014 672 ntBASIC19.96■□□□□ 0.79
PTPN1P18031 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PTPN1P18031 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.96■□□□□ 0.79
PTPN1P18031 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
PTPN1P18031 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.96■□□□□ 0.79
PTPN1P18031 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.96■□□□□ 0.79
PTPN1P18031 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN1P18031 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPN1P18031 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN1P18031 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PTPN1P18031 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 AL109659.2-201ENST00000606809 1674 ntBASIC19.95■□□□□ 0.78
PTPN1P18031 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 DUX4L26-201ENST00000489078 1255 ntBASIC19.95■□□□□ 0.78
PTPN1P18031 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.95■□□□□ 0.78
PTPN1P18031 AL049597.2-201ENST00000565575 961 ntBASIC19.95■□□□□ 0.78
PTPN1P18031 MIR3180-5-201ENST00000583743 153 ntBASIC19.95■□□□□ 0.78
PTPN1P18031 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
PTPN1P18031 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
PTPN1P18031 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 AC036111.1-201ENST00000533973 1582 ntBASIC19.95■□□□□ 0.78
PTPN1P18031 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN1P18031 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPN1P18031 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPN1P18031 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN1P18031 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN1P18031 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN1P18031 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN1P18031 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN1P18031 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PTPN1P18031 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN1P18031 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN1P18031 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PTPN1P18031 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN1P18031 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTPN1P18031 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PTPN1P18031 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
PTPN1P18031 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.94■□□□□ 0.78
PTPN1P18031 AK4P3-201ENST00000418260 669 ntBASIC19.94■□□□□ 0.78
PTPN1P18031 YBX1P2-201ENST00000489612 999 ntBASIC19.94■□□□□ 0.78
PTPN1P18031 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PTPN1P18031 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN1P18031 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN1P18031 AC010331.1-201ENST00000611423 582 ntBASIC19.94■□□□□ 0.78
PTPN1P18031 AC011558.1-201ENST00000623459 338 ntBASIC19.94■□□□□ 0.78
PTPN1P18031 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN1P18031 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN1P18031 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN1P18031 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 AC008556.1-201ENST00000610908 2040 ntBASIC19.93■□□□□ 0.78
PTPN1P18031 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PTPN1P18031 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.93■□□□□ 0.78
PTPN1P18031 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
PTPN1P18031 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN1P18031 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN1P18031 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN1P18031 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN1P18031 NEK4P2-201ENST00000580004 1012 ntBASIC19.93■□□□□ 0.78
PTPN1P18031 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN1P18031 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PTPN1P18031 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN1P18031 AC140113.3-201ENST00000605663 199 ntBASIC19.93■□□□□ 0.78
PTPN1P18031 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms