Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA4P13612 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA4P13612 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA4P13612 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA4P13612 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA4P13612 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA4P13612 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA4P13612 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ITGA4P13612 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ITGA4P13612 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ITGA4P13612 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA4P13612 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.69■□□□□ 0.9
ITGA4P13612 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ITGA4P13612 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA4P13612 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITGA4P13612 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.69■□□□□ 0.9
ITGA4P13612 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGA4P13612 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ITGA4P13612 AL032819.2-201ENST00000624543 2162 ntBASIC20.68■□□□□ 0.9
ITGA4P13612 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.68■□□□□ 0.9
ITGA4P13612 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGA4P13612 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 TSPY5P-201ENST00000426936 936 ntBASIC20.68■□□□□ 0.9
ITGA4P13612 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.68■□□□□ 0.9
ITGA4P13612 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGA4P13612 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ITGA4P13612 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.68■□□□□ 0.9
ITGA4P13612 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGA4P13612 KRT8P45-201ENST00000414328 1447 ntBASIC20.68■□□□□ 0.9
ITGA4P13612 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGA4P13612 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ITGA4P13612 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ITGA4P13612 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA4P13612 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA4P13612 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ITGA4P13612 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA4P13612 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA4P13612 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA4P13612 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.67■□□□□ 0.9
ITGA4P13612 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGA4P13612 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGA4P13612 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ITGA4P13612 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.67■□□□□ 0.9
ITGA4P13612 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.67■□□□□ 0.9
ITGA4P13612 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA4P13612 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA4P13612 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
ITGA4P13612 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGA4P13612 AC140113.3-201ENST00000605663 199 ntBASIC20.67■□□□□ 0.9
ITGA4P13612 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGA4P13612 AC011558.1-201ENST00000623459 338 ntBASIC20.67■□□□□ 0.9
ITGA4P13612 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA4P13612 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA4P13612 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA4P13612 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA4P13612 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.67■□□□□ 0.9
ITGA4P13612 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGA4P13612 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGA4P13612 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ITGA4P13612 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.66■□□□□ 0.9
ITGA4P13612 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ITGA4P13612 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.66■□□□□ 0.9
ITGA4P13612 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.66■□□□□ 0.9
ITGA4P13612 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.66■□□□□ 0.9
ITGA4P13612 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.66■□□□□ 0.9
ITGA4P13612 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.66■□□□□ 0.9
ITGA4P13612 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGA4P13612 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.66■□□□□ 0.9
ITGA4P13612 AL031432.5-201ENST00000641059 760 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms