Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
BMP4P12644 AC069544.1-201ENST00000609399 999 ntBASIC17.28■□□□□ 0.36
BMP4P12644 AL359736.2-201ENST00000621992 437 ntBASIC17.28■□□□□ 0.36
BMP4P12644 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP4P12644 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.28■□□□□ 0.36
BMP4P12644 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP4P12644 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP4P12644 KRT8P36-201ENST00000489121 1440 ntBASIC17.28■□□□□ 0.36
BMP4P12644 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
BMP4P12644 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
BMP4P12644 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP4P12644 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
BMP4P12644 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
BMP4P12644 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BMP4P12644 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
BMP4P12644 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.27■□□□□ 0.36
BMP4P12644 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.27■□□□□ 0.36
BMP4P12644 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.27■□□□□ 0.36
BMP4P12644 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BMP4P12644 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
BMP4P12644 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.27■□□□□ 0.35
BMP4P12644 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BMP4P12644 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
BMP4P12644 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BMP4P12644 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BMP4P12644 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BMP4P12644 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BMP4P12644 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BMP4P12644 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
BMP4P12644 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.26■□□□□ 0.35
BMP4P12644 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
BMP4P12644 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
BMP4P12644 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.26■□□□□ 0.35
BMP4P12644 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.26■□□□□ 0.35
BMP4P12644 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 PRKY-204ENST00000533551 1019 ntBASIC17.26■□□□□ 0.35
BMP4P12644 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.26■□□□□ 0.35
BMP4P12644 AC124067.4-201ENST00000519691 2379 ntBASIC17.26■□□□□ 0.35
BMP4P12644 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
BMP4P12644 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
BMP4P12644 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BMP4P12644 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.26■□□□□ 0.35
BMP4P12644 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.26■□□□□ 0.35
BMP4P12644 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.26■□□□□ 0.35
BMP4P12644 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BMP4P12644 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BMP4P12644 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.25■□□□□ 0.35
BMP4P12644 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.25■□□□□ 0.35
BMP4P12644 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BMP4P12644 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 HCG11-201ENST00000411553 5696 ntBASIC17.25■□□□□ 0.35
BMP4P12644 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.25■□□□□ 0.35
BMP4P12644 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BMP4P12644 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
BMP4P12644 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.25■□□□□ 0.35
BMP4P12644 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.25■□□□□ 0.35
BMP4P12644 AC008550.1-201ENST00000511500 884 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms