Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT3P12035 AL512353.2-201ENST00000448759 1962 ntBASIC19.88■□□□□ 0.77
KRT3P12035 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
KRT3P12035 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
KRT3P12035 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT3P12035 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
KRT3P12035 AL031598.1-201ENST00000561511 1773 ntBASIC19.88■□□□□ 0.77
KRT3P12035 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT3P12035 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
KRT3P12035 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KRT3P12035 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT3P12035 KRT8P3-201ENST00000519669 1449 ntBASIC19.87■□□□□ 0.77
KRT3P12035 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT3P12035 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
KRT3P12035 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.87■□□□□ 0.77
KRT3P12035 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.87■□□□□ 0.77
KRT3P12035 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT3P12035 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT3P12035 DGCR10-201ENST00000609839 495 ntBASIC19.87■□□□□ 0.77
KRT3P12035 REXO1L10P-201ENST00000615707 1290 ntBASIC19.87■□□□□ 0.77
KRT3P12035 REXO1L12P-201ENST00000622156 912 ntBASIC19.87■□□□□ 0.77
KRT3P12035 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT3P12035 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 AL138781.2-201ENST00000617896 1843 ntBASIC19.87■□□□□ 0.77
KRT3P12035 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT3P12035 Z98044.1-201ENST00000632503 1764 ntBASIC19.87■□□□□ 0.77
KRT3P12035 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
KRT3P12035 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT3P12035 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
KRT3P12035 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
KRT3P12035 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
KRT3P12035 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT3P12035 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT3P12035 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.86■□□□□ 0.77
KRT3P12035 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT3P12035 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.86■□□□□ 0.77
KRT3P12035 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
KRT3P12035 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT3P12035 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
KRT3P12035 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT3P12035 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
KRT3P12035 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
KRT3P12035 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KRT3P12035 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
KRT3P12035 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
KRT3P12035 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT3P12035 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT3P12035 SLC25A1P4-201ENST00000567977 778 ntBASIC19.85■□□□□ 0.77
KRT3P12035 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT3P12035 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT3P12035 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
KRT3P12035 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT3P12035 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT3P12035 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT3P12035 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 AC096733.2-201ENST00000609937 1394 ntBASIC19.84■□□□□ 0.77
KRT3P12035 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT3P12035 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT3P12035 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT3P12035 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT3P12035 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms