Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.44■□□□□ 0.38
UBL4AP11441 TNXA-203ENST00000507684 2038 ntBASIC17.44■□□□□ 0.38
UBL4AP11441 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 MIR718-201ENST00000390190 70 ntBASIC17.44■□□□□ 0.38
UBL4AP11441 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
UBL4AP11441 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.44■□□□□ 0.38
UBL4AP11441 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.44■□□□□ 0.38
UBL4AP11441 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBL4AP11441 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.44■□□□□ 0.38
UBL4AP11441 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.44■□□□□ 0.38
UBL4AP11441 AC113410.3-201ENST00000623366 203 ntBASIC17.44■□□□□ 0.38
UBL4AP11441 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.44■□□□□ 0.38
UBL4AP11441 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.44■□□□□ 0.38
UBL4AP11441 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.44■□□□□ 0.38
UBL4AP11441 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.44■□□□□ 0.38
UBL4AP11441 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBL4AP11441 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBL4AP11441 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBL4AP11441 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
UBL4AP11441 FSCN1P1-201ENST00000568912 1481 ntBASIC17.44■□□□□ 0.38
UBL4AP11441 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
UBL4AP11441 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.43■□□□□ 0.38
UBL4AP11441 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.43■□□□□ 0.38
UBL4AP11441 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.43■□□□□ 0.38
UBL4AP11441 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.43■□□□□ 0.38
UBL4AP11441 B3GAT3P1-201ENST00000471720 806 ntBASIC17.43■□□□□ 0.38
UBL4AP11441 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.43■□□□□ 0.38
UBL4AP11441 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.43■□□□□ 0.38
UBL4AP11441 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.43■□□□□ 0.38
UBL4AP11441 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.43■□□□□ 0.38
UBL4AP11441 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.43■□□□□ 0.38
UBL4AP11441 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.43■□□□□ 0.38
UBL4AP11441 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.43■□□□□ 0.38
UBL4AP11441 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
UBL4AP11441 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.43■□□□□ 0.38
UBL4AP11441 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
UBL4AP11441 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBL4AP11441 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBL4AP11441 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.42■□□□□ 0.38
UBL4AP11441 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.42■□□□□ 0.38
UBL4AP11441 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.42■□□□□ 0.38
UBL4AP11441 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UBL4AP11441 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.42■□□□□ 0.38
UBL4AP11441 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
UBL4AP11441 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.42■□□□□ 0.38
UBL4AP11441 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.42■□□□□ 0.38
UBL4AP11441 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.42■□□□□ 0.38
UBL4AP11441 FAM207BP-201ENST00000447172 505 ntBASIC17.42■□□□□ 0.38
UBL4AP11441 AC008550.1-201ENST00000511500 884 ntBASIC17.42■□□□□ 0.38
UBL4AP11441 NUDT16P1-203ENST00000513809 620 ntBASIC17.42■□□□□ 0.38
UBL4AP11441 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.42■□□□□ 0.38
UBL4AP11441 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.42■□□□□ 0.38
UBL4AP11441 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.42■□□□□ 0.38
UBL4AP11441 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBL4AP11441 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
UBL4AP11441 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.42■□□□□ 0.38
UBL4AP11441 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UBL4AP11441 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms