Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
APOA4P06727 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
APOA4P06727 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.92■□□□□ 0.62
APOA4P06727 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.92■□□□□ 0.62
APOA4P06727 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOA4P06727 AC135050.7-201ENST00000624508 2218 ntBASIC18.92■□□□□ 0.62
APOA4P06727 AC005082.1-201ENST00000413042 2259 ntBASIC18.91■□□□□ 0.62
APOA4P06727 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.91■□□□□ 0.62
APOA4P06727 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.91■□□□□ 0.62
APOA4P06727 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
APOA4P06727 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.91■□□□□ 0.62
APOA4P06727 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 AC012618.2-201ENST00000428058 849 ntBASIC18.91■□□□□ 0.62
APOA4P06727 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.91■□□□□ 0.62
APOA4P06727 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
APOA4P06727 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.91■□□□□ 0.62
APOA4P06727 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.91■□□□□ 0.62
APOA4P06727 CR392000.1-201ENST00000624770 1228 ntBASIC18.91■□□□□ 0.62
APOA4P06727 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.91■□□□□ 0.62
APOA4P06727 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
APOA4P06727 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.91■□□□□ 0.62
APOA4P06727 BCL2-203ENST00000589955 5011 ntBASIC18.91■□□□□ 0.62
APOA4P06727 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
APOA4P06727 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA4P06727 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
APOA4P06727 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.9■□□□□ 0.62
APOA4P06727 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
APOA4P06727 RPS2P55-201ENST00000397318 883 ntBASIC18.9■□□□□ 0.62
APOA4P06727 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
APOA4P06727 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
APOA4P06727 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 AC107956.1-201ENST00000494359 873 ntBASIC18.9■□□□□ 0.62
APOA4P06727 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.9■□□□□ 0.62
APOA4P06727 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.9■□□□□ 0.62
APOA4P06727 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.9■□□□□ 0.62
APOA4P06727 AC083906.6-201ENST00000641366 219 ntBASIC18.9■□□□□ 0.62
APOA4P06727 AP006294.2-201ENST00000641667 209 ntBASIC18.9■□□□□ 0.62
APOA4P06727 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
APOA4P06727 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
APOA4P06727 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
APOA4P06727 AC104581.1-202ENST00000635932 2618 ntBASIC18.9■□□□□ 0.62
APOA4P06727 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.9■□□□□ 0.62
APOA4P06727 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA4P06727 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
APOA4P06727 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
APOA4P06727 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
APOA4P06727 AC090340.1-201ENST00000620778 4980 ntBASIC18.89■□□□□ 0.62
APOA4P06727 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA4P06727 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.89■□□□□ 0.61
APOA4P06727 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
APOA4P06727 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.89■□□□□ 0.61
APOA4P06727 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA4P06727 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
APOA4P06727 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APOA4P06727 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA4P06727 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
APOA4P06727 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA4P06727 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
APOA4P06727 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA4P06727 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
APOA4P06727 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.89■□□□□ 0.61
APOA4P06727 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APOA4P06727 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
APOA4P06727 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.89■□□□□ 0.61
APOA4P06727 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.89■□□□□ 0.61
APOA4P06727 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.89■□□□□ 0.61
APOA4P06727 AL031985.4-201ENST00000642138 673 ntBASIC18.89■□□□□ 0.61
APOA4P06727 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.89■□□□□ 0.61
APOA4P06727 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA4P06727 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms