Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DPB1P04440 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DPB1P04440 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
HLA-DPB1P04440 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
HLA-DPB1P04440 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DPB1P04440 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.96■□□□□ 0.3
HLA-DPB1P04440 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.96■□□□□ 0.3
HLA-DPB1P04440 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 FZD10-202ENST00000539839 3282 ntBASIC16.95■□□□□ 0.3
HLA-DPB1P04440 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 ANO7L1-203ENST00000602586 1720 ntBASIC16.95■□□□□ 0.3
HLA-DPB1P04440 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DPB1P04440 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DPB1P04440 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms