Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.85□□□□□ -0.03
TRGV3P03979 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.85□□□□□ -0.03
TRGV3P03979 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRGV3P03979 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
TRGV3P03979 MIR1238-201ENST00000408483 83 ntBASIC14.85□□□□□ -0.03
TRGV3P03979 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV3P03979 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.85□□□□□ -0.03
TRGV3P03979 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRGV3P03979 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.85□□□□□ -0.03
TRGV3P03979 FEM1AP3-201ENST00000403722 1741 ntBASIC14.85□□□□□ -0.03
TRGV3P03979 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.85□□□□□ -0.03
TRGV3P03979 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV3P03979 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV3P03979 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV3P03979 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.84□□□□□ -0.03
TRGV3P03979 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TRGV3P03979 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TRGV3P03979 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRGV3P03979 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRGV3P03979 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV3P03979 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TRGV3P03979 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV3P03979 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.84□□□□□ -0.03
TRGV3P03979 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRGV3P03979 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRGV3P03979 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRGV3P03979 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.84□□□□□ -0.03
TRGV3P03979 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV3P03979 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV3P03979 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV3P03979 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRGV3P03979 AC079598.2-202ENST00000546624 1451 ntBASIC14.83□□□□□ -0.03
TRGV3P03979 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV3P03979 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV3P03979 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV3P03979 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV3P03979 AL161938.1-201ENST00000569833 2180 ntBASIC14.83□□□□□ -0.04
TRGV3P03979 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRGV3P03979 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
TRGV3P03979 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
TRGV3P03979 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV3P03979 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV3P03979 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRGV3P03979 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.83□□□□□ -0.04
TRGV3P03979 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.83□□□□□ -0.04
TRGV3P03979 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV3P03979 AC096733.2-201ENST00000609937 1394 ntBASIC14.83□□□□□ -0.04
TRGV3P03979 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.83□□□□□ -0.04
TRGV3P03979 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms