Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.79■□□□□ 0.44
CLPTM1O96005 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLPTM1O96005 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.79■□□□□ 0.44
CLPTM1O96005 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLPTM1O96005 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.79■□□□□ 0.44
CLPTM1O96005 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLPTM1O96005 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 GNAS-203ENST00000306120 1878 ntBASIC17.79■□□□□ 0.44
CLPTM1O96005 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.79■□□□□ 0.44
CLPTM1O96005 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLPTM1O96005 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.79■□□□□ 0.44
CLPTM1O96005 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLPTM1O96005 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPTM1O96005 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.78■□□□□ 0.44
CLPTM1O96005 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.78■□□□□ 0.44
CLPTM1O96005 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLPTM1O96005 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLPTM1O96005 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLPTM1O96005 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLPTM1O96005 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.78■□□□□ 0.44
CLPTM1O96005 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.78■□□□□ 0.44
CLPTM1O96005 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.78■□□□□ 0.44
CLPTM1O96005 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.78■□□□□ 0.44
CLPTM1O96005 CYP2T1P-201ENST00000432607 1285 ntBASIC17.78■□□□□ 0.44
CLPTM1O96005 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.78■□□□□ 0.44
CLPTM1O96005 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.78■□□□□ 0.44
CLPTM1O96005 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLPTM1O96005 AL591742.1-201ENST00000604433 565 ntBASIC17.78■□□□□ 0.44
CLPTM1O96005 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.78■□□□□ 0.44
CLPTM1O96005 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.78■□□□□ 0.44
CLPTM1O96005 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CLPTM1O96005 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPTM1O96005 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPTM1O96005 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CLPTM1O96005 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLPTM1O96005 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLPTM1O96005 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.77■□□□□ 0.44
CLPTM1O96005 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLPTM1O96005 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLPTM1O96005 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLPTM1O96005 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPTM1O96005 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPTM1O96005 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.77■□□□□ 0.44
CLPTM1O96005 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CLPTM1O96005 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.77■□□□□ 0.44
CLPTM1O96005 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLPTM1O96005 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.77■□□□□ 0.44
CLPTM1O96005 AC134043.2-201ENST00000624206 2238 ntBASIC17.77■□□□□ 0.44
CLPTM1O96005 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.77■□□□□ 0.44
CLPTM1O96005 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLPTM1O96005 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLPTM1O96005 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CLPTM1O96005 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLPTM1O96005 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLPTM1O96005 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.77■□□□□ 0.43
CLPTM1O96005 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLPTM1O96005 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.77■□□□□ 0.43
CLPTM1O96005 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.77■□□□□ 0.43
CLPTM1O96005 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLPTM1O96005 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLPTM1O96005 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
CLPTM1O96005 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CLPTM1O96005 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CLPTM1O96005 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.76■□□□□ 0.43
CLPTM1O96005 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLPTM1O96005 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms