Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CNOT4O95628 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT4O95628 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CNOT4O95628 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.75■□□□□ 0.27
CNOT4O95628 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CNOT4O95628 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT4O95628 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT4O95628 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT4O95628 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.75■□□□□ 0.27
CNOT4O95628 SLC25A3P1-201ENST00000443844 931 ntBASIC16.75■□□□□ 0.27
CNOT4O95628 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT4O95628 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.75■□□□□ 0.27
CNOT4O95628 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT4O95628 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CNOT4O95628 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.75■□□□□ 0.27
CNOT4O95628 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT4O95628 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CNOT4O95628 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT4O95628 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT4O95628 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT4O95628 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT4O95628 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT4O95628 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
CNOT4O95628 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT4O95628 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CNOT4O95628 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.74■□□□□ 0.27
CNOT4O95628 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT4O95628 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CNOT4O95628 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CNOT4O95628 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CNOT4O95628 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.73■□□□□ 0.27
CNOT4O95628 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.73■□□□□ 0.27
CNOT4O95628 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.73■□□□□ 0.27
CNOT4O95628 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CNOT4O95628 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.73■□□□□ 0.27
CNOT4O95628 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.73■□□□□ 0.27
CNOT4O95628 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.73■□□□□ 0.27
CNOT4O95628 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CNOT4O95628 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.73■□□□□ 0.27
CNOT4O95628 FAM87A-204ENST00000613235 858 ntBASIC16.73■□□□□ 0.27
CNOT4O95628 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.73■□□□□ 0.27
CNOT4O95628 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.73■□□□□ 0.27
CNOT4O95628 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNOT4O95628 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT4O95628 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT4O95628 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT4O95628 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT4O95628 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CNOT4O95628 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNOT4O95628 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CNOT4O95628 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.72■□□□□ 0.27
CNOT4O95628 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CNOT4O95628 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CNOT4O95628 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CNOT4O95628 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.72■□□□□ 0.27
CNOT4O95628 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CNOT4O95628 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms