Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.46■□□□□ 0.87
EXTL3O43909 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EXTL3O43909 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
EXTL3O43909 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXTL3O43909 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.46■□□□□ 0.87
EXTL3O43909 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXTL3O43909 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXTL3O43909 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
EXTL3O43909 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.46■□□□□ 0.87
EXTL3O43909 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.46■□□□□ 0.87
EXTL3O43909 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXTL3O43909 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
EXTL3O43909 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
EXTL3O43909 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.45■□□□□ 0.86
EXTL3O43909 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.45■□□□□ 0.86
EXTL3O43909 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.45■□□□□ 0.86
EXTL3O43909 HMGA1P5-201ENST00000412453 271 ntBASIC20.45■□□□□ 0.86
EXTL3O43909 TMPOP1-202ENST00000424642 1267 ntBASIC20.45■□□□□ 0.86
EXTL3O43909 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
EXTL3O43909 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.45■□□□□ 0.86
EXTL3O43909 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
EXTL3O43909 AL445228.2-201ENST00000605589 952 ntBASIC20.45■□□□□ 0.86
EXTL3O43909 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
EXTL3O43909 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.45■□□□□ 0.86
EXTL3O43909 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.45■□□□□ 0.86
EXTL3O43909 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXTL3O43909 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.44■□□□□ 0.86
EXTL3O43909 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.44■□□□□ 0.86
EXTL3O43909 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
EXTL3O43909 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.44■□□□□ 0.86
EXTL3O43909 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXTL3O43909 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXTL3O43909 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.44■□□□□ 0.86
EXTL3O43909 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXTL3O43909 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.44■□□□□ 0.86
EXTL3O43909 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.44■□□□□ 0.86
EXTL3O43909 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.44■□□□□ 0.86
EXTL3O43909 RN7SL850P-201ENST00000579959 291 ntBASIC20.44■□□□□ 0.86
EXTL3O43909 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EXTL3O43909 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EXTL3O43909 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXTL3O43909 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
EXTL3O43909 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.44■□□□□ 0.86
EXTL3O43909 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EXTL3O43909 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
EXTL3O43909 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 AC008556.1-201ENST00000610908 2040 ntBASIC20.43■□□□□ 0.86
EXTL3O43909 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
EXTL3O43909 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.43■□□□□ 0.86
EXTL3O43909 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
EXTL3O43909 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
EXTL3O43909 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
EXTL3O43909 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.43■□□□□ 0.86
EXTL3O43909 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXTL3O43909 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
EXTL3O43909 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
EXTL3O43909 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
EXTL3O43909 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.42■□□□□ 0.86
EXTL3O43909 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXTL3O43909 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.42■□□□□ 0.86
EXTL3O43909 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXTL3O43909 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.42■□□□□ 0.86
EXTL3O43909 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXTL3O43909 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.42■□□□□ 0.86
EXTL3O43909 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EXTL3O43909 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
EXTL3O43909 SLC25A3P1-201ENST00000443844 931 ntBASIC20.42■□□□□ 0.86
EXTL3O43909 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.42■□□□□ 0.86
EXTL3O43909 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.42■□□□□ 0.86
EXTL3O43909 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.42■□□□□ 0.86
EXTL3O43909 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.42■□□□□ 0.86
EXTL3O43909 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.42■□□□□ 0.86
EXTL3O43909 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
EXTL3O43909 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EXTL3O43909 MTMR9LP-203ENST00000426597 1545 ntBASIC20.42■□□□□ 0.86
EXTL3O43909 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.42■□□□□ 0.86
EXTL3O43909 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.42■□□□□ 0.86
EXTL3O43909 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EXTL3O43909 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms