Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
NDUFS4O43181 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS4O43181 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NDUFS4O43181 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS4O43181 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS4O43181 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFS4O43181 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS4O43181 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS4O43181 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.06■□□□□ 0.48
NDUFS4O43181 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS4O43181 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.06■□□□□ 0.48
NDUFS4O43181 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS4O43181 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS4O43181 NAPSB-206ENST00000562112 1266 ntBASIC18.06■□□□□ 0.48
NDUFS4O43181 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.06■□□□□ 0.48
NDUFS4O43181 AC083906.6-201ENST00000641366 219 ntBASIC18.06■□□□□ 0.48
NDUFS4O43181 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NDUFS4O43181 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
NDUFS4O43181 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NDUFS4O43181 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NDUFS4O43181 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
NDUFS4O43181 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFS4O43181 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFS4O43181 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.05■□□□□ 0.48
NDUFS4O43181 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.05■□□□□ 0.48
NDUFS4O43181 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NDUFS4O43181 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
NDUFS4O43181 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.05■□□□□ 0.48
NDUFS4O43181 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.05■□□□□ 0.48
NDUFS4O43181 CA15P1-201ENST00000481698 905 ntBASIC18.05■□□□□ 0.48
NDUFS4O43181 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.05■□□□□ 0.48
NDUFS4O43181 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.05■□□□□ 0.48
NDUFS4O43181 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.05■□□□□ 0.48
NDUFS4O43181 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 CYP2D8P-201ENST00000433633 1490 ntBASIC18.05■□□□□ 0.48
NDUFS4O43181 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NDUFS4O43181 KRT8P3-201ENST00000519669 1449 ntBASIC18.05■□□□□ 0.48
NDUFS4O43181 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFS4O43181 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.04■□□□□ 0.48
NDUFS4O43181 AC093503.3-201ENST00000624917 2352 ntBASIC18.04■□□□□ 0.48
NDUFS4O43181 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.04■□□□□ 0.48
NDUFS4O43181 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.04■□□□□ 0.48
NDUFS4O43181 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NDUFS4O43181 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 AC087499.1-201ENST00000418141 1075 ntBASIC18.04■□□□□ 0.48
NDUFS4O43181 SLC25A1P2-201ENST00000430693 912 ntBASIC18.04■□□□□ 0.48
NDUFS4O43181 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.04■□□□□ 0.48
NDUFS4O43181 AC073912.3-201ENST00000624414 853 ntBASIC18.04■□□□□ 0.48
NDUFS4O43181 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.04■□□□□ 0.48
NDUFS4O43181 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NDUFS4O43181 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFS4O43181 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NDUFS4O43181 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.04■□□□□ 0.48
NDUFS4O43181 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDUFS4O43181 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDUFS4O43181 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
NDUFS4O43181 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDUFS4O43181 AC004408.2-201ENST00000623613 2777 ntBASIC18.03■□□□□ 0.48
NDUFS4O43181 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDUFS4O43181 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms