Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.71■□□□□ 0.27
NPIPB4C9JG80 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
NPIPB4C9JG80 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
NPIPB4C9JG80 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NPIPB4C9JG80 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 AL357033.4-201ENST00000617703 1807 ntBASIC16.7■□□□□ 0.26
NPIPB4C9JG80 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 AC097488.1-201ENST00000507834 756 ntBASIC16.7■□□□□ 0.26
NPIPB4C9JG80 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 Z99916.2-201ENST00000604037 246 ntBASIC16.7■□□□□ 0.26
NPIPB4C9JG80 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NPIPB4C9JG80 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 AC008550.1-201ENST00000511500 884 ntBASIC16.69■□□□□ 0.26
NPIPB4C9JG80 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 AC120498.9-201ENST00000339021 3867 ntBASIC16.69■□□□□ 0.26
NPIPB4C9JG80 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPB4C9JG80 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 AC005082.1-201ENST00000413042 2259 ntBASIC16.68■□□□□ 0.26
NPIPB4C9JG80 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 MIR4785-201ENST00000585005 73 ntBASIC16.68■□□□□ 0.26
NPIPB4C9JG80 TMEM191A-211ENST00000637163 1067 ntBASIC16.68■□□□□ 0.26
NPIPB4C9JG80 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.68■□□□□ 0.26
NPIPB4C9JG80 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPB4C9JG80 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms