Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 AC141257.4-201ENST00000634557 245 ntBASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 AC136944.6-201ENST00000634818 245 ntBASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.66■□□□□ 0.74
YJEFN3A6XGL0 HEIH-201ENST00000623091 1652 ntBASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 AP000974.1-201ENST00000623909 2387 ntBASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 TMPOP1-202ENST00000424642 1267 ntBASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 AL512604.3-201ENST00000569583 964 ntBASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 WWOX-216ENST00000569818 525 ntBASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 AC083906.6-201ENST00000641366 219 ntBASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
YJEFN3A6XGL0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
YJEFN3A6XGL0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
YJEFN3A6XGL0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
YJEFN3A6XGL0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 MIR3180-5-201ENST00000583743 153 ntBASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
YJEFN3A6XGL0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms