Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01546A6NGU7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 AC124283.5-201ENST00000624661 1809 ntBASIC13.32□□□□□ -0.28
LINC01546A6NGU7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 AL589743.5-201ENST00000616611 1050 ntBASIC13.32□□□□□ -0.28
LINC01546A6NGU7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LINC01546A6NGU7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 AC022211.2-201ENST00000585075 2527 ntBASIC13.31□□□□□ -0.28
LINC01546A6NGU7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 AC073210.2-201ENST00000430369 194 ntBASIC13.31□□□□□ -0.28
LINC01546A6NGU7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 RCC2P6-201ENST00000526625 1557 ntBASIC13.31□□□□□ -0.28
LINC01546A6NGU7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 AP001094.4-201ENST00000579008 2176 ntBASIC13.31□□□□□ -0.28
LINC01546A6NGU7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC01546A6NGU7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 LINC00602-201ENST00000629776 2065 ntBASIC13.3□□□□□ -0.28
LINC01546A6NGU7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms