Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LRCOL1A6NCL2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 KRT8P11-201ENST00000409686 1436 ntBASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 AC007663.1-201ENST00000438948 1240 ntBASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 KRT18P57-201ENST00000443599 1254 ntBASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 AC010653.2-201ENST00000623505 997 ntBASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 AC106820.2-201ENST00000563775 3264 ntBASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LRCOL1A6NCL2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 AC092338.2-201ENST00000568827 1415 ntBASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 HMGA1P5-201ENST00000412453 271 ntBASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 LIN28AP1-201ENST00000429574 405 ntBASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 TSPY17P-201ENST00000450329 467 ntBASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 AL353719.1-201ENST00000566847 864 ntBASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LRCOL1A6NCL2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms