Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 RN7SL606P-201ENST00000472779 293 ntBASIC21.99■■□□□ 1.11
SSC5DA1L4H1 AF238378.1-201ENST00000526806 358 ntBASIC21.99■■□□□ 1.11
SSC5DA1L4H1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.99■■□□□ 1.11
SSC5DA1L4H1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.98■■□□□ 1.11
SSC5DA1L4H1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 SLC25A1P1-201ENST00000528351 927 ntBASIC21.98■■□□□ 1.11
SSC5DA1L4H1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 LINC01711-201ENST00000598340 967 ntBASIC21.98■■□□□ 1.11
SSC5DA1L4H1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SSC5DA1L4H1 Z82202.1-201ENST00000623446 1880 ntBASIC21.98■■□□□ 1.11
SSC5DA1L4H1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 AL137060.1-201ENST00000618151 2648 ntBASIC21.97■■□□□ 1.11
SSC5DA1L4H1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 NUS1P2-201ENST00000417358 873 ntBASIC21.97■■□□□ 1.11
SSC5DA1L4H1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SSC5DA1L4H1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSC5DA1L4H1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SSC5DA1L4H1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
SSC5DA1L4H1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SSC5DA1L4H1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.95■■□□□ 1.11
SSC5DA1L4H1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.11
SSC5DA1L4H1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.95■■□□□ 1.11
SSC5DA1L4H1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.95■■□□□ 1.11
SSC5DA1L4H1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
SSC5DA1L4H1 IGHV3-41-201ENST00000613121 348 ntBASIC21.95■■□□□ 1.11
SSC5DA1L4H1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.95■■□□□ 1.11
SSC5DA1L4H1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSC5DA1L4H1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms