Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 SLC25A6P5-201ENST00000435663 894 ntBASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRBV27A0A0K0K1C4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 GNAS-203ENST00000306120 1878 ntBASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 BX276092.2-201ENST00000417668 665 ntBASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 AC087623.3-201ENST00000607047 1098 ntBASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 MYC-208ENST00000641036 567 ntBASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRBV27A0A0K0K1C4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV27A0A0K0K1C4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV27A0A0K0K1C4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRBV27A0A0K0K1C4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV27A0A0K0K1C4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV27A0A0K0K1C4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV27A0A0K0K1C4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV27A0A0K0K1C4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV27A0A0K0K1C4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV27A0A0K0K1C4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV27A0A0K0K1C4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV27A0A0K0K1C4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV27A0A0K0K1C4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms