Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC163A0A0D9SF12 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 VENTXP7-201ENST00000475503 772 ntBASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC163A0A0D9SF12 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC163A0A0D9SF12 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC163A0A0D9SF12 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC163A0A0D9SF12 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 RN7SL606P-201ENST00000472779 293 ntBASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 AC120114.3-201ENST00000611923 658 ntBASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 LINC00167-201ENST00000530583 1419 ntBASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC163A0A0D9SF12 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 IGHGP-201ENST00000390555 1178 ntBASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 AL590627.1-203ENST00000421194 1026 ntBASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 AL671883.3-201ENST00000603274 991 ntBASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 LINC00565-201ENST00000562710 2331 ntBASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC163A0A0D9SF12 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC163A0A0D9SF12 AL512353.2-201ENST00000448759 1962 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms