Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXB3P14651 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXB3P14651 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXB3P14651 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXB3P14651 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXB3P14651 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXB3P14651 RNU6-664P-201ENST00000362381 107 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 RNU4-58P-201ENST00000363192 141 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 RNU6-824P-201ENST00000363724 104 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 SNORA25.5-201ENST00000363782 126 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 RNU6-654P-201ENST00000364373 107 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 SNORD101-201ENST00000384027 73 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 MTND4LP1-201ENST00000446263 157 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 snoU13.26-201ENST00000459452 105 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 AC092185.1-201ENST00000491371 97 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 RNU11-2P-201ENST00000516898 142 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 SUB1P4-201ENST00000566062 339 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 TRDV1-202ENST00000621643 102 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
HOXB3P14651 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXB3P14651 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXB3P14651 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HOXB3P14651 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXB3P14651 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
HOXB3P14651 MIR563-201ENST00000385080 79 ntBASIC3.36□□□□□ -1.87
HOXB3P14651 RNA5SP508-201ENST00000411327 119 ntBASIC3.36□□□□□ -1.87
HOXB3P14651 RNU6-579P-201ENST00000516879 102 ntBASIC3.36□□□□□ -1.87
HOXB3P14651 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
HOXB3P14651 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXB3P14651 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXB3P14651 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXB3P14651 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXB3P14651 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HOXB3P14651 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HOXB3P14651 MIR424-201ENST00000362227 98 ntBASIC3.35□□□□□ -1.87
HOXB3P14651 Y_RNA.226-201ENST00000364337 114 ntBASIC3.35□□□□□ -1.87
HOXB3P14651 MIR520A-201ENST00000384862 85 ntBASIC3.35□□□□□ -1.87
HOXB3P14651 AC244023.1-201ENST00000426884 112 ntBASIC3.35□□□□□ -1.87
HOXB3P14651 AC242498.1-201ENST00000604134 111 ntBASIC3.35□□□□□ -1.87
HOXB3P14651 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXB3P14651 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXB3P14651 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXB3P14651 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXB3P14651 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXB3P14651 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXB3P14651 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.34□□□□□ -1.87
HOXB3P14651 RPS29P31-201ENST00000446147 164 ntBASIC3.34□□□□□ -1.87
HOXB3P14651 RNU6-274P-201ENST00000459566 107 ntBASIC3.34□□□□□ -1.87
HOXB3P14651 MIR4696-201ENST00000581431 70 ntBASIC3.34□□□□□ -1.87
HOXB3P14651 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HOXB3P14651 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXB3P14651 MAPK10-373ENST00000641983 6772 ntBASIC3.33□□□□□ -1.88
HOXB3P14651 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXB3P14651 RNU6-369P-201ENST00000362515 102 ntBASIC3.33□□□□□ -1.88
HOXB3P14651 RNU6-668P-201ENST00000364180 107 ntBASIC3.33□□□□□ -1.88
HOXB3P14651 AC026333.2-201ENST00000542164 106 ntBASIC3.33□□□□□ -1.88
HOXB3P14651 MIR4738-201ENST00000579134 87 ntBASIC3.33□□□□□ -1.88
HOXB3P14651 MIR3616-201ENST00000584070 92 ntBASIC3.33□□□□□ -1.88
HOXB3P14651 RNU7-10P-201ENST00000607194 63 ntBASIC3.33□□□□□ -1.88
HOXB3P14651 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
HOXB3P14651 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HOXB3P14651 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXB3P14651 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXB3P14651 RNA5SP192-201ENST00000364404 120 ntBASIC3.32□□□□□ -1.88
HOXB3P14651 AC006989.1-201ENST00000427212 131 ntBASIC3.32□□□□□ -1.88
HOXB3P14651 RNU6-531P-201ENST00000516694 104 ntBASIC3.32□□□□□ -1.88
HOXB3P14651 RNU6-1057P-201ENST00000517162 102 ntBASIC3.32□□□□□ -1.88
HOXB3P14651 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXB3P14651 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HOXB3P14651 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXB3P14651 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.32□□□□□ -1.88
HOXB3P14651 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
HOXB3P14651 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXB3P14651 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HOXB3P14651 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXB3P14651 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HOXB3P14651 RNU6-446P-201ENST00000362827 106 ntBASIC3.31□□□□□ -1.88
HOXB3P14651 MIR519A1-201ENST00000385257 85 ntBASIC3.31□□□□□ -1.88
HOXB3P14651 AC009474.2-201ENST00000451383 136 ntBASIC3.31□□□□□ -1.88
HOXB3P14651 snoU13.27-201ENST00000459278 104 ntBASIC3.31□□□□□ -1.88
HOXB3P14651 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
HOXB3P14651 AC099513.1-201ENST00000490423 301 ntBASIC3.31□□□□□ -1.88
HOXB3P14651 RNA5SP481-201ENST00000516814 122 ntBASIC3.31□□□□□ -1.88
HOXB3P14651 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXB3P14651 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXB3P14651 MIR30D-201ENST00000362283 70 ntBASIC3.3□□□□□ -1.88
HOXB3P14651 RNU6-461P-201ENST00000364195 107 ntBASIC3.3□□□□□ -1.88
HOXB3P14651 Y_RNA.375-201ENST00000365625 101 ntBASIC3.3□□□□□ -1.88
HOXB3P14651 RNU7-195P-201ENST00000458793 62 ntBASIC3.3□□□□□ -1.88
HOXB3P14651 RNA5SP380-201ENST00000517190 98 ntBASIC3.3□□□□□ -1.88
HOXB3P14651 AC007318.2-201ENST00000620999 243 ntBASIC3.3□□□□□ -1.88
HOXB3P14651 MIR4773-1-201ENST00000637203 78 ntBASIC3.3□□□□□ -1.88
HOXB3P14651 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXB3P14651 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXB3P14651 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXB3P14651 MAPK10-362ENST00000641864 4484 ntBASIC3.29□□□□□ -1.88
HOXB3P14651 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXB3P14651 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXB3P14651 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms