Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 SCARNA22-201ENST00000503991 125 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR132-201ENST00000591554 101 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 LINC01355-201ENST00000566551 5444 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 AC112198.2-201ENST00000426589 6996 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR372-201ENST00000362225 67 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNU6-502P-201ENST00000362419 108 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 Y_RNA.59-201ENST00000362828 102 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNU1-83P-201ENST00000363426 164 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNA5SP22-201ENST00000365393 109 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR581-201ENST00000384895 96 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR218-2-201ENST00000385006 110 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR513A1-201ENST00000385138 129 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR644A-201ENST00000385262 94 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 SNORA49-201ENST00000386157 136 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNU6-220P-201ENST00000390919 107 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNU6-360P-201ENST00000390944 104 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 SNORA48.4-201ENST00000391089 134 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 HIST1H2APS3-201ENST00000403259 134 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RPS29P17-201ENST00000430795 166 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 JTBP1-201ENST00000441314 247 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 PPP1R11P1-201ENST00000486095 376 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNU6-732P-201ENST00000516033 103 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 IGKV2-26-201ENST00000518305 343 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 AC036111.3-201ENST00000526389 112 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 AC040958.1-201ENST00000561102 201 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR4433B-201ENST00000581329 102 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 AC019176.2-201ENST00000611579 315 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR3653-201ENST00000625572 110 ntBASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC1.32□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR379-201ENST00000362218 67 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 SNORD8-201ENST00000363915 110 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 Y_RNA.223-201ENST00000364290 113 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNA5SP513-201ENST00000364648 118 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNA5SP366-201ENST00000365454 123 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNA5SP167-201ENST00000365461 116 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 GNG5P2-201ENST00000372054 207 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR34B-201ENST00000385076 84 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR548AJ2-201ENST00000408539 92 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 Y_RNA.613-201ENST00000410726 97 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 SNORA57.3-201ENST00000411095 141 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 CRIP1P1-201ENST00000427567 185 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 RN7SL810P-201ENST00000493031 276 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 AC012314.7-201ENST00000619693 93 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 MIR6888-201ENST00000621977 67 ntBASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-11Q9BYQ6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-11Q9BYQ6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-11Q9BYQ6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-11Q9BYQ6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-11Q9BYQ6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-11Q9BYQ6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-11Q9BYQ6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-11Q9BYQ6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-11Q9BYQ6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms