Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RNA5SP51-201ENST00000364750 119 ntBASIC5.5□□□□□ -1.53
SCAF1Q9H7N4 RNU7-143P-201ENST00000516781 65 ntBASIC5.5□□□□□ -1.53
SCAF1Q9H7N4 SCARNA14-201ENST00000516903 136 ntBASIC5.5□□□□□ -1.53
SCAF1Q9H7N4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC5.5□□□□□ -1.53
SCAF1Q9H7N4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.5□□□□□ -1.53
SCAF1Q9H7N4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.5□□□□□ -1.53
SCAF1Q9H7N4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCAF1Q9H7N4 AC245517.4-201ENST00000448601 281 ntBASIC5.49□□□□□ -1.53
SCAF1Q9H7N4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.49□□□□□ -1.53
SCAF1Q9H7N4 AC110079.1-202ENST00000635213 138 ntBASIC5.49□□□□□ -1.53
SCAF1Q9H7N4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC5.49□□□□□ -1.53
SCAF1Q9H7N4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SCAF1Q9H7N4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC5.49□□□□□ -1.53
SCAF1Q9H7N4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC5.49□□□□□ -1.53
SCAF1Q9H7N4 Y_RNA.119-201ENST00000363301 96 ntBASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 RNU6-949P-201ENST00000384040 107 ntBASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 MIR3169-201ENST00000578032 83 ntBASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 MIR4425-201ENST00000580572 84 ntBASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 AC019129.1-201ENST00000403786 261 ntBASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 AC005326.1-201ENST00000429197 123 ntBASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 AL662814.1-201ENST00000617364 121 ntBASIC5.48□□□□□ -1.53
SCAF1Q9H7N4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 AC093908.1-201ENST00000623125 8092 ntBASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 SNORD38B-201ENST00000384690 67 ntBASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 RNU6-808P-201ENST00000391233 108 ntBASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 RNU2-37P-201ENST00000410695 177 ntBASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 AL137849.1-201ENST00000604767 169 ntBASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 AC022513.1-201ENST00000624512 117 ntBASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 SNORD38B-202ENST00000625943 69 ntBASIC5.47□□□□□ -1.53
SCAF1Q9H7N4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCAF1Q9H7N4 WWP1P1-201ENST00000466609 2769 ntBASIC5.46□□□□□ -1.54
SCAF1Q9H7N4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SCAF1Q9H7N4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.46□□□□□ -1.54
SCAF1Q9H7N4 RNU6-23P-201ENST00000363283 107 ntBASIC5.46□□□□□ -1.54
SCAF1Q9H7N4 RNU6-936P-201ENST00000384005 107 ntBASIC5.46□□□□□ -1.54
SCAF1Q9H7N4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SCAF1Q9H7N4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.46□□□□□ -1.54
SCAF1Q9H7N4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SCAF1Q9H7N4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.45□□□□□ -1.54
SCAF1Q9H7N4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SCAF1Q9H7N4 SNORA25B-201ENST00000365507 128 ntBASIC5.45□□□□□ -1.54
SCAF1Q9H7N4 RNU7-106P-201ENST00000459514 67 ntBASIC5.45□□□□□ -1.54
SCAF1Q9H7N4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.45□□□□□ -1.54
SCAF1Q9H7N4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.45□□□□□ -1.54
SCAF1Q9H7N4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5.45□□□□□ -1.54
SCAF1Q9H7N4 AC012531.5-201ENST00000611375 151 ntBASIC5.45□□□□□ -1.54
SCAF1Q9H7N4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCAF1Q9H7N4 RN7SKP220-201ENST00000410611 288 ntBASIC5.44□□□□□ -1.54
SCAF1Q9H7N4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.44□□□□□ -1.54
SCAF1Q9H7N4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.44□□□□□ -1.54
SCAF1Q9H7N4 U4.3-201ENST00000621047 82 ntBASIC5.44□□□□□ -1.54
SCAF1Q9H7N4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCAF1Q9H7N4 RNU6-604P-201ENST00000390917 100 ntBASIC5.43□□□□□ -1.54
SCAF1Q9H7N4 HMGN2P39-201ENST00000398005 273 ntBASIC5.43□□□□□ -1.54
SCAF1Q9H7N4 ARF4P2-201ENST00000430209 526 ntBASIC5.43□□□□□ -1.54
SCAF1Q9H7N4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC5.43□□□□□ -1.54
SCAF1Q9H7N4 AC023141.11-201ENST00000508864 202 ntBASIC5.43□□□□□ -1.54
SCAF1Q9H7N4 MIR548AO-201ENST00000579992 96 ntBASIC5.43□□□□□ -1.54
SCAF1Q9H7N4 AC092634.7-201ENST00000621022 103 ntBASIC5.43□□□□□ -1.54
SCAF1Q9H7N4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SCAF1Q9H7N4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCAF1Q9H7N4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCAF1Q9H7N4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCAF1Q9H7N4 RNU6-1187P-201ENST00000364771 110 ntBASIC5.42□□□□□ -1.54
SCAF1Q9H7N4 MIR5187-201ENST00000583479 76 ntBASIC5.42□□□□□ -1.54
SCAF1Q9H7N4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC5.42□□□□□ -1.54
SCAF1Q9H7N4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC5.42□□□□□ -1.54
SCAF1Q9H7N4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 RNA5SP399-201ENST00000364003 117 ntBASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 RNU6-1031P-201ENST00000384773 107 ntBASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 MIR4325-201ENST00000583049 90 ntBASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 AL162274.2-201ENST00000614406 332 ntBASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SCAF1Q9H7N4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCAF1Q9H7N4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 RNU6-1184P-201ENST00000384588 108 ntBASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 Y_RNA.606-201ENST00000410579 103 ntBASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 MIR3140-201ENST00000583685 90 ntBASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SCAF1Q9H7N4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCAF1Q9H7N4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms