Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA4Q9Y5G9 IPO8P1-201ENST00000455509 3109 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU6-161P-201ENST00000363051 106 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 RNA5SP72-201ENST00000364442 117 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 SNORA68.1-201ENST00000364537 132 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU6-649P-201ENST00000384463 107 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU6-1067P-201ENST00000384752 107 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU4-37P-201ENST00000410214 84 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 snoU13.16-201ENST00000459350 104 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 AC104619.4-201ENST00000510773 249 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 FGF7P7-201ENST00000514120 227 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU6-70P-201ENST00000516438 60 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR3169-201ENST00000578032 83 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 AL512598.1-201ENST00000610158 273 ntBASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA4Q9Y5G9 RNA5SP97-201ENST00000365006 84 ntBASIC3.72□□□□□ -1.81
PCDHGA4Q9Y5G9 Y_RNA.537-201ENST00000384626 109 ntBASIC3.72□□□□□ -1.81
PCDHGA4Q9Y5G9 MIR199A2-201ENST00000385289 110 ntBASIC3.72□□□□□ -1.81
PCDHGA4Q9Y5G9 RPS29P4-201ENST00000414733 161 ntBASIC3.72□□□□□ -1.81
PCDHGA4Q9Y5G9 SNORD123-201ENST00000459473 70 ntBASIC3.72□□□□□ -1.81
PCDHGA4Q9Y5G9 RPS27P29-201ENST00000463110 252 ntBASIC3.72□□□□□ -1.81
PCDHGA4Q9Y5G9 SNORA70.19-201ENST00000516717 90 ntBASIC3.72□□□□□ -1.81
PCDHGA4Q9Y5G9 RNU6-807P-201ENST00000516805 107 ntBASIC3.72□□□□□ -1.81
PCDHGA4Q9Y5G9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 RNU6-23P-201ENST00000363283 107 ntBASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 MIR183-201ENST00000384958 110 ntBASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 RNU6-687P-201ENST00000516443 89 ntBASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 U3.45-201ENST00000607547 219 ntBASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 U6.105-201ENST00000637379 88 ntBASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA4Q9Y5G9 AL355596.1-201ENST00000565399 3996 ntBASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 HSBP1P2-201ENST00000299671 229 ntBASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 SNORA3.3-201ENST00000408712 125 ntBASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 HSPE1P9-201ENST00000440046 311 ntBASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 AC093850.1-201ENST00000454121 251 ntBASIC3.7□□□□□ -1.82
PCDHGA4Q9Y5G9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 RNU6-1019P-201ENST00000364424 107 ntBASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 RNU6-950P-201ENST00000384651 107 ntBASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 RNA5SP293-201ENST00000410527 113 ntBASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 RNU6-1108P-201ENST00000516308 104 ntBASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 MIR1297-201ENST00000637311 77 ntBASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PCDHGA4Q9Y5G9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 MTND4LP19-201ENST00000403051 166 ntBASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 RNU7-85P-201ENST00000458851 63 ntBASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 RPS29P11-201ENST00000496507 171 ntBASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 AC069114.2-201ENST00000604699 304 ntBASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA4Q9Y5G9 AL035423.1-201ENST00000420331 213 ntBASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 AC003685.2-201ENST00000422795 395 ntBASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 SCARNA14-201ENST00000516903 136 ntBASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 MIR4484-201ENST00000582855 83 ntBASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 AP000753.3-201ENST00000604083 169 ntBASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 SNORA62.6-201ENST00000606322 83 ntBASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 Z97988.1-201ENST00000637697 135 ntBASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PCDHGA4Q9Y5G9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
PCDHGA4Q9Y5G9 Y_RNA.532-201ENST00000384590 113 ntBASIC3.66□□□□□ -1.82
PCDHGA4Q9Y5G9 RN7SL293P-201ENST00000481765 281 ntBASIC3.66□□□□□ -1.82
PCDHGA4Q9Y5G9 RNA5SP164-201ENST00000516533 110 ntBASIC3.66□□□□□ -1.82
PCDHGA4Q9Y5G9 SNORD59.2-201ENST00000516873 68 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms