RNA–Protein interactions for RNA: ENST00000516308.1

RNU6-1108P-201, Transcript of RNA, U6 small nuclear 1108, pseudogene, humanhuman

BASIC

Gene RNU6-1108P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1108P-201ENST00000516308 AEBP2Q6ZN18 517 aaPredicted RBP9.75□□□□□ -0.85
RNU6-1108P-201ENST00000516308 CHIC1Q5VXU3 224 aa9.24□□□□□ -0.93
RNU6-1108P-201ENST00000516308 SENP3Q9H4L4 574 aaPredicted RBP8.55□□□□□ -1.04
RNU6-1108P-201ENST00000516308 POTEDQ86YR6 584 aa8.52□□□□□ -1.05
RNU6-1108P-201ENST00000516308 PHF23Q9BUL5 403 aaPredicted RBP8.27□□□□□ -1.09
RNU6-1108P-201ENST00000516308 FOXD1Q16676 465 aa7.95□□□□□ -1.14
RNU6-1108P-201ENST00000516308 MSH5O43196 834 aa7.78□□□□□ -1.16
RNU6-1108P-201ENST00000516308 PIAS4Q8N2W9 510 aaPredicted RBP7.31□□□□□ -1.24
RNU6-1108P-201ENST00000516308 CACNB1Q02641 598 aaPredicted RBP6.97□□□□□ -1.29
RNU6-1108P-201ENST00000516308 PPP6R1Q9UPN7 881 aa6.91□□□□□ -1.3
RNU6-1108P-201ENST00000516308 ADRA2BP18089 450 aa6.86□□□□□ -1.31
RNU6-1108P-201ENST00000516308 PLPPR3Q6T4P5 718 aa6.77□□□□□ -1.33
RNU6-1108P-201ENST00000516308 DMRT2Q9Y5R5 561 aa6.65□□□□□ -1.34
RNU6-1108P-201ENST00000516308 POTEHQ6S545 545 aa6.58□□□□□ -1.36
RNU6-1108P-201ENST00000516308 RNF39Q9H2S5 420 aa6.52□□□□□ -1.37
RNU6-1108P-201ENST00000516308 MAPK8IP2Q13387 824 aaPredicted RBP6.46□□□□□ -1.38
RNU6-1108P-201ENST00000516308 C1QBPQ07021 282 aaKnown RBP6.45□□□□□ -1.38
RNU6-1108P-201ENST00000516308 SCAF1Q9H7N4 1312 aaKnown RBP6.44□□□□□ -1.38
RNU6-1108P-201ENST00000516308 DCAF8L1A6NGE4 600 aa6.36□□□□□ -1.39
RNU6-1108P-201ENST00000516308 DNAJC5BQ9UF47 199 aa6.19□□□□□ -1.42
RNU6-1108P-201ENST00000516308 HOXD11P31277 338 aaPredicted RBP6.18□□□□□ -1.42
RNU6-1108P-201ENST00000516308 RNF216Q9NWF9 866 aaPredicted RBP5.98□□□□□ -1.45
RNU6-1108P-201ENST00000516308 SP7Q8TDD2 431 aaPredicted RBP5.9□□□□□ -1.46
RNU6-1108P-201ENST00000516308 DSG3P32926 999 aa5.89□□□□□ -1.47
RNU6-1108P-201ENST00000516308 CNKSR2Q8WXI2 1034 aa5.88□□□□□ -1.47
RNU6-1108P-201ENST00000516308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.87□□□□□ -1.47
RNU6-1108P-201ENST00000516308 PPP4R3CPQ6ZMV5 832 aa5.8□□□□□ -1.48
RNU6-1108P-201ENST00000516308 CAPN15O75808 1086 aa5.78□□□□□ -1.48
RNU6-1108P-201ENST00000516308 CHRDL2Q6WN34 429 aa5.77□□□□□ -1.49
RNU6-1108P-201ENST00000516308 RBM42Q9BTD8 480 aaKnown RBP5.74□□□□□ -1.49
RNU6-1108P-201ENST00000516308 SPINK5Q9NQ38 1064 aaPredicted RBP5.71□□□□□ -1.5
RNU6-1108P-201ENST00000516308 U3KPZ7 1027 aaPredicted RBP5.65□□□□□ -1.5
RNU6-1108P-201ENST00000516308 PLSCR2Q9NRY7 297 aa5.64□□□□□ -1.51
RNU6-1108P-201ENST00000516308 APLP2Q06481 763 aa5.59□□□□□ -1.51
RNU6-1108P-201ENST00000516308 ZNF219Q9P2Y4 722 aaPredicted RBP5.58□□□□□ -1.52
RNU6-1108P-201ENST00000516308 HAX1O00165 279 aa5.55□□□□□ -1.52
RNU6-1108P-201ENST00000516308 ABCB7O75027 752 aa5.54□□□□□ -1.52
RNU6-1108P-201ENST00000516308 TRHP20396 242 aaPredicted RBP5.51□□□□□ -1.53
RNU6-1108P-201ENST00000516308 LHX8Q68G74 356 aa5.51□□□□□ -1.53
RNU6-1108P-201ENST00000516308 NCBP3Q53F19 620 aaKnown RBP5.48□□□□□ -1.53
RNU6-1108P-201ENST00000516308 PIP4P2Q8N4L2 257 aa5.48□□□□□ -1.53
RNU6-1108P-201ENST00000516308 AKT1S1Q96B36 256 aa5.43□□□□□ -1.54
RNU6-1108P-201ENST00000516308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.41□□□□□ -1.54
RNU6-1108P-201ENST00000516308 HNRNPUL2Q1KMD3 747 aaKnown RBP5.41□□□□□ -1.54
RNU6-1108P-201ENST00000516308 FXR2P51116 673 aaKnown RBP eCLIP5.38□□□□□ -1.55
RNU6-1108P-201ENST00000516308 EVX2Q03828 476 aa5.35□□□□□ -1.55
RNU6-1108P-201ENST00000516308 REM2Q8IYK8 340 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1108P-201ENST00000516308 SAMD1Q6SPF0 538 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1108P-201ENST00000516308 NPM3O75607 178 aaKnown RBP5.3□□□□□ -1.56
RNU6-1108P-201ENST00000516308 PITPNM1O00562 1244 aa5.28□□□□□ -1.56
RNU6-1108P-201ENST00000516308 PCDH10Q9P2E7 1040 aa5.28□□□□□ -1.56
RNU6-1108P-201ENST00000516308 GABBR2O75899 941 aa5.27□□□□□ -1.57
RNU6-1108P-201ENST00000516308 POLA2Q14181 598 aa5.25□□□□□ -1.57
RNU6-1108P-201ENST00000516308 C19orf67A6NJJ6 358 aa5.22□□□□□ -1.57
RNU6-1108P-201ENST00000516308 ZBTB12Q9Y330 459 aaPredicted RBP5.22□□□□□ -1.57
RNU6-1108P-201ENST00000516308 POTEMA6NI47 508 aa5.21□□□□□ -1.58
RNU6-1108P-201ENST00000516308 SLC4A2P04920 1241 aa5.2□□□□□ -1.58
RNU6-1108P-201ENST00000516308 POTEGQ6S5H5 508 aa5.18□□□□□ -1.58
RNU6-1108P-201ENST00000516308 PRKAR2AP13861 404 aaKnown RBP5.14□□□□□ -1.59
RNU6-1108P-201ENST00000516308 CLCN6P51797 869 aa5.14□□□□□ -1.59
RNU6-1108P-201ENST00000516308 POTEIP0CG38 1075 aa5.11□□□□□ -1.59
RNU6-1108P-201ENST00000516308 OSCARQ8IYS5 282 aa5.09□□□□□ -1.59
RNU6-1108P-201ENST00000516308 OTUD5Q96G74 571 aa5.06□□□□□ -1.6
RNU6-1108P-201ENST00000516308 DCBLD2Q96PD2 775 aa5.04□□□□□ -1.6
RNU6-1108P-201ENST00000516308 SPDYE1Q8NFV5 336 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1108P-201ENST00000516308 MYCNP04198 464 aaPredicted RBP4.98□□□□□ -1.61
RNU6-1108P-201ENST00000516308 SPDYE2BA6NHP3 402 aa4.96□□□□□ -1.62
RNU6-1108P-201ENST00000516308 SPDYE6P0CI01 402 aa4.96□□□□□ -1.62
RNU6-1108P-201ENST00000516308 SPDYE2Q495Y8 402 aa4.96□□□□□ -1.62
RNU6-1108P-201ENST00000516308 CLEC11AQ9Y240 323 aa4.96□□□□□ -1.62
RNU6-1108P-201ENST00000516308 CD44P16070 742 aaKnown RBP4.95□□□□□ -1.62
RNU6-1108P-201ENST00000516308 POTEB2H3BUK9 544 aa4.91□□□□□ -1.62
RNU6-1108P-201ENST00000516308 MAMSTRQ6ZN01 415 aa4.9□□□□□ -1.63
RNU6-1108P-201ENST00000516308 CHADLQ6NUI6 762 aa4.89□□□□□ -1.63
RNU6-1108P-201ENST00000516308 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
RNU6-1108P-201ENST00000516308 ZNF579Q8NAF0 562 aaKnown RBP4.87□□□□□ -1.63
RNU6-1108P-201ENST00000516308 CDAN1Q8IWY9 1227 aa4.86□□□□□ -1.63
RNU6-1108P-201ENST00000516308 FAM163AQ96GL9 167 aaPredicted RBP4.85□□□□□ -1.63
RNU6-1108P-201ENST00000516308 PRR29P0C7W0 189 aa4.83□□□□□ -1.64
RNU6-1108P-201ENST00000516308 FARP1Q9Y4F1 1045 aaPredicted RBP4.83□□□□□ -1.64
RNU6-1108P-201ENST00000516308 SCUBE2Q9NQ36 999 aa4.81□□□□□ -1.64
RNU6-1108P-201ENST00000516308 MMRN1Q13201 1228 aa4.8□□□□□ -1.64
RNU6-1108P-201ENST00000516308 GALR2O43603 387 aaPredicted RBP4.79□□□□□ -1.64
RNU6-1108P-201ENST00000516308 ATF5Q9Y2D1 282 aaPredicted RBP4.79□□□□□ -1.64
RNU6-1108P-201ENST00000516308 SSUH2Q9Y2M2 353 aa4.79□□□□□ -1.64
RNU6-1108P-201ENST00000516308 FBLN2P98095 1184 aa4.78□□□□□ -1.64
RNU6-1108P-201ENST00000516308 C7P10643 843 aa4.77□□□□□ -1.65
RNU6-1108P-201ENST00000516308 ZRANB1Q9UGI0 708 aa4.77□□□□□ -1.65
RNU6-1108P-201ENST00000516308 METRNQ9UJH8 293 aa4.77□□□□□ -1.65
RNU6-1108P-201ENST00000516308 SLC39A7Q92504 469 aa4.76□□□□□ -1.65
RNU6-1108P-201ENST00000516308 ZNF692Q9BU19 519 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1108P-201ENST00000516308 POTEJP0CG39 1038 aa4.74□□□□□ -1.65
RNU6-1108P-201ENST00000516308 SPNS2Q8IVW8 549 aa4.74□□□□□ -1.65
RNU6-1108P-201ENST00000516308 PELP1Q8IZL8 1130 aaKnown RBP4.72□□□□□ -1.65
RNU6-1108P-201ENST00000516308 ASTLQ6HA08 431 aaPredicted RBP4.71□□□□□ -1.66
RNU6-1108P-201ENST00000516308 PAK3O75914 559 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1108P-201ENST00000516308 ATMINO43313 823 aaPredicted RBP4.65□□□□□ -1.67
RNU6-1108P-201ENST00000516308 PABPN1Q86U42 306 aaKnown RBP eCLIP4.64□□□□□ -1.67
RNU6-1108P-201ENST00000516308 KCNA4P22459 653 aa4.63□□□□□ -1.67
RNU6-1108P-201ENST00000516308 ST18O60284 1047 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms