Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MIR6793-201ENST00000612376 63 ntBASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-4Q9BYR3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 BCORP1-203ENST00000513194 5093 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU1-19P-201ENST00000363306 165 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 Y_RNA.374-201ENST00000365606 101 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR585-201ENST00000384887 94 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6-1111P-201ENST00000391118 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 RPS26P8-201ENST00000393490 348 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 BMS1P17-202ENST00000416720 316 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 RPS26P47-201ENST00000427219 348 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC079780.1-201ENST00000428259 207 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AL445665.1-202ENST00000452436 324 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC006463.2-201ENST00000473326 348 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC004057.1-201ENST00000485827 348 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 ATP5LP3-201ENST00000514223 304 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6-1282P-201ENST00000516735 96 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6-1121P-201ENST00000516802 109 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORD19.2-201ENST00000516978 73 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 IGLV2-28-201ENST00000520681 304 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AP005639.1-201ENST00000526939 192 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AL390726.5-202ENST00000564800 256 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MRPS21P7-201ENST00000566937 238 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR3186-201ENST00000577404 85 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SL176P-201ENST00000580352 264 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR1273E-201ENST00000581165 102 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR4436B2-201ENST00000581415 91 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR4436B1-201ENST00000583272 91 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC104408.1-201ENST00000605241 170 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR6768-201ENST00000610734 72 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 RNA5SP440-201ENST00000612665 119 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC022202.1-201ENST00000613515 211 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC008133.2-201ENST00000624540 351 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 AC110079.1-202ENST00000635213 138 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR3199-2-201ENST00000636243 86 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR6715B-201ENST00000637172 77 ntBASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-4Q9BYR3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC1.03□□□□□ -2.25
KRTAP4-4Q9BYR3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC1.03□□□□□ -2.25
KRTAP4-4Q9BYR3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
KRTAP4-4Q9BYR3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
KRTAP4-4Q9BYR3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
KRTAP4-4Q9BYR3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms