Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTCH2Q9Y6C5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.31■■□□□ 1
PTCH2Q9Y6C5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTCH2Q9Y6C5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 AL139424.1-201ENST00000607572 797 ntBASIC21.3■■□□□ 1
PTCH2Q9Y6C5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 AC104417.2-201ENST00000562989 1793 ntBASIC21.3■■□□□ 1
PTCH2Q9Y6C5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PTCH2Q9Y6C5 AC022898.2-201ENST00000616822 1312 ntBASIC21.29■■□□□ 1
PTCH2Q9Y6C5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 AF186996.4-201ENST00000467186 377 ntBASIC21.29■■□□□ 1
PTCH2Q9Y6C5 AC093909.1-201ENST00000504731 1122 ntBASIC21.29■■□□□ 1
PTCH2Q9Y6C5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 AC124864.1-201ENST00000623408 392 ntBASIC21.29■■□□□ 1
PTCH2Q9Y6C5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PTCH2Q9Y6C5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 RPL13AP23-201ENST00000480739 586 ntBASIC21.28■■□□□ 1
PTCH2Q9Y6C5 AC091607.1-201ENST00000490318 1060 ntBASIC21.28■■□□□ 1
PTCH2Q9Y6C5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.28■■□□□ 1
PTCH2Q9Y6C5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 GPR32P1-201ENST00000601788 811 ntBASIC21.27■■□□□ 1
PTCH2Q9Y6C5 AL049840.3-201ENST00000602669 611 ntBASIC21.27■■□□□ 1
PTCH2Q9Y6C5 AC055717.3-201ENST00000622967 595 ntBASIC21.27■■□□□ 1
PTCH2Q9Y6C5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTCH2Q9Y6C5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PTCH2Q9Y6C5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PTCH2Q9Y6C5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PTCH2Q9Y6C5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PTCH2Q9Y6C5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCH2Q9Y6C5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCH2Q9Y6C5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCH2Q9Y6C5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.26■□□□□ 0.99
PTCH2Q9Y6C5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCH2Q9Y6C5 MIR564-202ENST00000385049 94 ntBASIC21.26■□□□□ 0.99
PTCH2Q9Y6C5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTCH2Q9Y6C5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.26■□□□□ 0.99
PTCH2Q9Y6C5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCH2Q9Y6C5 RN7SL606P-201ENST00000472779 293 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms