Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 LINC00167-201ENST00000530583 1419 ntBASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN10AQ9Y5Y9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 Z83836.1-201ENST00000624605 1642 ntBASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 AC233702.3-201ENST00000578656 1387 ntBASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SCN10AQ9Y5Y9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 AC034236.2-201ENST00000606662 1610 ntBASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 TSPY12P-201ENST00000421279 868 ntBASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCN10AQ9Y5Y9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 KRT18P31-201ENST00000506277 1292 ntBASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.67■□□□□ 0.9
SCN10AQ9Y5Y9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 AC104819.1-201ENST00000504587 486 ntBASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 AP000867.3-201ENST00000524675 377 ntBASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 AP000347.1-202ENST00000435868 847 ntBASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCN10AQ9Y5Y9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 KRT8P32-201ENST00000512863 1461 ntBASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms