Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 AL358472.4-201ENST00000633140 710 ntBASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA3Q9Y5H0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA3Q9Y5H0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 AC092647.4-201ENST00000457211 535 ntBASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA3Q9Y5H0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 UPK3BP1-201ENST00000428678 509 ntBASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 HOMER2P1-201ENST00000455653 964 ntBASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 CKBP1-201ENST00000565489 1086 ntBASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA3Q9Y5H0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 AC011558.1-201ENST00000623459 338 ntBASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA3Q9Y5H0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms