Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA4Q9Y5G9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 AC104076.2-201ENST00000448912 469 ntBASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA4Q9Y5G9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 AC012497.1-201ENST00000429392 575 ntBASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms