Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB1Q9Y5F3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
PCDHB1Q9Y5F3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 INGX-201ENST00000359239 846 ntBASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 AC011506.1-201ENST00000474329 610 ntBASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 EGLN1P1-201ENST00000531623 762 ntBASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 AP005242.2-201ENST00000580065 1175 ntBASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 AL049812.1-201ENST00000432563 2267 ntBASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB1Q9Y5F3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 TSPY14P-201ENST00000303979 915 ntBASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 CRYGFP-201ENST00000418459 633 ntBASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB1Q9Y5F3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 AC004951.3-201ENST00000418645 1148 ntBASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 AC097488.1-201ENST00000507834 756 ntBASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 PRSS44-201ENST00000515154 1146 ntBASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 DGCR10-201ENST00000609839 495 ntBASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 AC120498.9-201ENST00000339021 3867 ntBASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB1Q9Y5F3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 RCC2P6-201ENST00000526625 1557 ntBASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 AK4P3-201ENST00000418260 669 ntBASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB1Q9Y5F3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms