Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB13Q9Y5F0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 FITM1-202ENST00000559294 800 ntBASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 AP000525.1-201ENST00000608286 694 ntBASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHB13Q9Y5F0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 AC006333.2-201ENST00000607957 2099 ntBASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHB13Q9Y5F0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 CA15P1-201ENST00000481698 905 ntBASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB13Q9Y5F0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
PCDHB13Q9Y5F0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB13Q9Y5F0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB13Q9Y5F0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB13Q9Y5F0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB13Q9Y5F0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHB13Q9Y5F0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB13Q9Y5F0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHB13Q9Y5F0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDHB13Q9Y5F0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms