Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
UBE2D4Q9Y2X8 AP000997.3-201ENST00000623333 2250 ntBASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 AC004911.1-201ENST00000416316 871 ntBASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBE2D4Q9Y2X8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2D4Q9Y2X8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
UBE2D4Q9Y2X8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
UBE2D4Q9Y2X8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
UBE2D4Q9Y2X8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
UBE2D4Q9Y2X8 AC020916.1-201ENST00000587762 1774 ntBASIC13.15□□□□□ -0.31
UBE2D4Q9Y2X8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms