Protein–RNA interactions for Protein: Q9UHI6

DDX20, Probable ATP-dependent RNA helicase DDX20, humanhuman

Known RBP Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX20Q9UHI6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 AC087289.5-201ENST00000586076 3175 ntBASIC21.34■■□□□ 1.01
DDX20Q9UHI6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 AL162741.1-201ENST00000565563 1558 ntBASIC21.34■■□□□ 1.01
DDX20Q9UHI6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX20Q9UHI6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.33■■□□□ 1.01
DDX20Q9UHI6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DDX20Q9UHI6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
DDX20Q9UHI6 GPAT2P1-201ENST00000444924 1672 ntBASIC21.33■■□□□ 1
DDX20Q9UHI6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
DDX20Q9UHI6 PCDHAC2-203ENST00000615316 3011 ntBASIC21.33■■□□□ 1
DDX20Q9UHI6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
DDX20Q9UHI6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX20Q9UHI6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DDX20Q9UHI6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
DDX20Q9UHI6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 GABARAPL3-202ENST00000624044 1851 ntBASIC21.32■■□□□ 1
DDX20Q9UHI6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 AC093525.10-201ENST00000625130 1569 ntBASIC21.32■■□□□ 1
DDX20Q9UHI6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
DDX20Q9UHI6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 CHCHD2P8-201ENST00000429873 447 ntBASIC21.32■■□□□ 1
DDX20Q9UHI6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 AC009078.2-202ENST00000463353 338 ntBASIC21.32■■□□□ 1
DDX20Q9UHI6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.32■■□□□ 1
DDX20Q9UHI6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.32■■□□□ 1
DDX20Q9UHI6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX20Q9UHI6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.31■■□□□ 1
DDX20Q9UHI6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
DDX20Q9UHI6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX20Q9UHI6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
DDX20Q9UHI6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
DDX20Q9UHI6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX20Q9UHI6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX20Q9UHI6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
DDX20Q9UHI6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX20Q9UHI6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX20Q9UHI6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
DDX20Q9UHI6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.31■■□□□ 1
DDX20Q9UHI6 EMBP1-201ENST00000458200 901 ntBASIC21.31■■□□□ 1
DDX20Q9UHI6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.31■■□□□ 1
DDX20Q9UHI6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.31■■□□□ 1
DDX20Q9UHI6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
DDX20Q9UHI6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.31■■□□□ 1
DDX20Q9UHI6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.31■■□□□ 1
DDX20Q9UHI6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.31■■□□□ 1
DDX20Q9UHI6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX20Q9UHI6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
DDX20Q9UHI6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DDX20Q9UHI6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
DDX20Q9UHI6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.31■■□□□ 1
DDX20Q9UHI6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.31■■□□□ 1
DDX20Q9UHI6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.31■■□□□ 1
DDX20Q9UHI6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
DDX20Q9UHI6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX20Q9UHI6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX20Q9UHI6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DDX20Q9UHI6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
DDX20Q9UHI6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX20Q9UHI6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX20Q9UHI6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DDX20Q9UHI6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms