Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC30.04■■■□□ 2.4
RIMBP3Q9UFD9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RIMBP3Q9UFD9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC30.03■■■□□ 2.4
RIMBP3Q9UFD9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RIMBP3Q9UFD9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RIMBP3Q9UFD9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RIMBP3Q9UFD9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
RIMBP3Q9UFD9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC30.03■■■□□ 2.4
RIMBP3Q9UFD9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC30.03■■■□□ 2.4
RIMBP3Q9UFD9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RIMBP3Q9UFD9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 MEIS3P1-201ENST00000495167 958 ntBASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 AC093512.1-201ENST00000617969 520 ntBASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RIMBP3Q9UFD9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RIMBP3Q9UFD9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC30.01■■■□□ 2.39
RIMBP3Q9UFD9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC30.01■■■□□ 2.39
RIMBP3Q9UFD9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC30.01■■■□□ 2.39
RIMBP3Q9UFD9 AC064836.3-201ENST00000607928 673 ntBASIC30.01■■■□□ 2.39
RIMBP3Q9UFD9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
RIMBP3Q9UFD9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC30.01■■■□□ 2.39
RIMBP3Q9UFD9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RIMBP3Q9UFD9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 BAD-202ENST00000394531 631 ntTSL 3 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 RCN1P2-201ENST00000398357 915 ntBASIC30■■■□□ 2.39
RIMBP3Q9UFD9 TSEN15P1-201ENST00000423257 515 ntBASIC30■■■□□ 2.39
RIMBP3Q9UFD9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC30■■■□□ 2.39
RIMBP3Q9UFD9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 AC022494.1-201ENST00000466044 728 ntBASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RIMBP3Q9UFD9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 HOXB1-202ENST00000577092 1414 ntBASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 AC063926.2-201ENST00000623766 1308 ntBASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 AC015922.1-201ENST00000421102 1152 ntBASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 AC005498.2-205ENST00000593218 784 ntBASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 AC024563.2-201ENST00000603282 481 ntBASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 AC002310.6-201ENST00000624451 1377 ntBASIC29.98■■■□□ 2.39
RIMBP3Q9UFD9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RIMBP3Q9UFD9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms