Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 AC105036.2-201ENST00000569468 176 ntBASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 SDHAP1-207ENST00000440850 2000 ntBASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPTLC3Q9NUV7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 SLC25A6P5-201ENST00000435663 894 ntBASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 AC073111.5-205ENST00000641717 521 ntBASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SPTLC3Q9NUV7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 AC092437.1-201ENST00000624794 1048 ntBASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC3Q9NUV7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 AF201337.1-201ENST00000520239 748 ntBASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 AC005829.2-201ENST00000571422 1056 ntBASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 AC080038.1-201ENST00000611274 1154 ntBASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SPTLC3Q9NUV7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SPTLC3Q9NUV7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SPTLC3Q9NUV7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SPTLC3Q9NUV7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC3Q9NUV7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC3Q9NUV7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms