Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
CISHQ9NSE2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.14■□□□□ 0.81
CISHQ9NSE2 CCR12P-201ENST00000446203 998 ntBASIC20.14■□□□□ 0.81
CISHQ9NSE2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CISHQ9NSE2 EGLN1P1-201ENST00000531623 762 ntBASIC20.14■□□□□ 0.81
CISHQ9NSE2 AL353719.1-201ENST00000566847 864 ntBASIC20.14■□□□□ 0.81
CISHQ9NSE2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CISHQ9NSE2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CISHQ9NSE2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CISHQ9NSE2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CISHQ9NSE2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CISHQ9NSE2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.14■□□□□ 0.81
CISHQ9NSE2 CROCCP3-202ENST00000420820 1947 ntBASIC20.14■□□□□ 0.81
CISHQ9NSE2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.14■□□□□ 0.81
CISHQ9NSE2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CISHQ9NSE2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CISHQ9NSE2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CISHQ9NSE2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CISHQ9NSE2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CISHQ9NSE2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CISHQ9NSE2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CISHQ9NSE2 TSPY17P-201ENST00000450329 467 ntBASIC20.13■□□□□ 0.81
CISHQ9NSE2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 AC073912.3-201ENST00000624414 853 ntBASIC20.13■□□□□ 0.81
CISHQ9NSE2 AC116562.4-202ENST00000641738 218 ntBASIC20.13■□□□□ 0.81
CISHQ9NSE2 AC068587.9-201ENST00000641814 219 ntBASIC20.13■□□□□ 0.81
CISHQ9NSE2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CISHQ9NSE2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.13■□□□□ 0.81
CISHQ9NSE2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CISHQ9NSE2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 RCC2P3-201ENST00000418112 1537 ntBASIC20.12■□□□□ 0.81
CISHQ9NSE2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 AC007663.1-201ENST00000438948 1240 ntBASIC20.12■□□□□ 0.81
CISHQ9NSE2 AP003041.3-201ENST00000527151 707 ntBASIC20.12■□□□□ 0.81
CISHQ9NSE2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 GPAT2P1-201ENST00000444924 1672 ntBASIC20.12■□□□□ 0.81
CISHQ9NSE2 HEIH-201ENST00000623091 1652 ntBASIC20.12■□□□□ 0.81
CISHQ9NSE2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CISHQ9NSE2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CISHQ9NSE2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CISHQ9NSE2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CISHQ9NSE2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CISHQ9NSE2 AC093503.3-201ENST00000624917 2352 ntBASIC20.11■□□□□ 0.81
CISHQ9NSE2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CISHQ9NSE2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CISHQ9NSE2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CISHQ9NSE2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CISHQ9NSE2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.11■□□□□ 0.81
CISHQ9NSE2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CISHQ9NSE2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
CISHQ9NSE2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CISHQ9NSE2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.1■□□□□ 0.81
CISHQ9NSE2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CISHQ9NSE2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CISHQ9NSE2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms