Protein–RNA interactions for Protein: Q9NRS6

SNX15, Sorting nexin-15, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15Q9NRS6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX15Q9NRS6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX15Q9NRS6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX15Q9NRS6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX15Q9NRS6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SNX15Q9NRS6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX15Q9NRS6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX15Q9NRS6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX15Q9NRS6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
SNX15Q9NRS6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 AP003097.1-201ENST00000530657 1135 ntBASIC18.8■□□□□ 0.6
SNX15Q9NRS6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX15Q9NRS6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 AC073592.3-201ENST00000625118 1834 ntBASIC18.79■□□□□ 0.6
SNX15Q9NRS6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 AC233263.1-201ENST00000578059 224 ntBASIC18.79■□□□□ 0.6
SNX15Q9NRS6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 HEIH-201ENST00000623091 1652 ntBASIC18.79■□□□□ 0.6
SNX15Q9NRS6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX15Q9NRS6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX15Q9NRS6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX15Q9NRS6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.78■□□□□ 0.6
SNX15Q9NRS6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNX15Q9NRS6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX15Q9NRS6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SNX15Q9NRS6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX15Q9NRS6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.78■□□□□ 0.6
SNX15Q9NRS6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SNX15Q9NRS6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms