Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBQLN4Q9NRR5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBQLN4Q9NRR5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 CA15P1-201ENST00000481698 905 ntBASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBQLN4Q9NRR5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.36■□□□□ 0.37
UBQLN4Q9NRR5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 CROCCP3-202ENST00000420820 1947 ntBASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN4Q9NRR5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms