Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 TSPY6P-201ENST00000448518 926 ntBASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 AL160286.2-201ENST00000567150 934 ntBASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 AL133373.2-201ENST00000623187 2828 ntBASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 NOC2LP2-201ENST00000407594 1944 ntBASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 HTR7P1-202ENST00000624664 4411 ntBASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE2Q9NRR3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CDC42SE2Q9NRR3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.02□□□□□ -0.32
CDC42SE2Q9NRR3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.02□□□□□ -0.32
CDC42SE2Q9NRR3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDC42SE2Q9NRR3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDC42SE2Q9NRR3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDC42SE2Q9NRR3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDC42SE2Q9NRR3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 GUSBP6-202ENST00000438529 1198 ntBASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 SOX15-203ENST00000570788 1093 ntBASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.02□□□□□ -0.33
CDC42SE2Q9NRR3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 NCF1B-203ENST00000435988 1254 ntBASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 TSPY23P-201ENST00000440136 739 ntBASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE2Q9NRR3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms