Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 AL031598.1-201ENST00000561511 1773 ntBASIC17.55■□□□□ 0.4
POLE3Q9NRF9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
POLE3Q9NRF9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 AC091390.4-202ENST00000476426 537 ntBASIC17.54■□□□□ 0.4
POLE3Q9NRF9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 CR392000.1-201ENST00000624770 1228 ntBASIC17.54■□□□□ 0.4
POLE3Q9NRF9 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.54■□□□□ 0.4
POLE3Q9NRF9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
POLE3Q9NRF9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLE3Q9NRF9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 PRORSD1P-201ENST00000295112 541 ntBASIC17.52■□□□□ 0.4
POLE3Q9NRF9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLE3Q9NRF9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms