Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 AC005332.8-201ENST00000622750 2735 ntBASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 RCC2P6-201ENST00000526625 1557 ntBASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.1■□□□□ 0.49
NECTIN3Q9NQS3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 FSCN1P1-201ENST00000568912 1481 ntBASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 AC008040.2-201ENST00000461049 708 ntBASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NECTIN3Q9NQS3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NECTIN3Q9NQS3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.08■□□□□ 0.49
NECTIN3Q9NQS3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
NECTIN3Q9NQS3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NECTIN3Q9NQS3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.08■□□□□ 0.49
NECTIN3Q9NQS3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.08■□□□□ 0.49
NECTIN3Q9NQS3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NECTIN3Q9NQS3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NECTIN3Q9NQS3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NECTIN3Q9NQS3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 AC004951.3-201ENST00000418645 1148 ntBASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 RBM17P1-201ENST00000453646 1190 ntBASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NECTIN3Q9NQS3 SDHAP1-207ENST00000440850 2000 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms