Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 AP000997.3-201ENST00000623333 2250 ntBASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 AL049637.2-201ENST00000641778 930 ntBASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CLK4Q9HAZ1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 AC090340.1-201ENST00000620778 4980 ntBASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 RPS2P4-201ENST00000476944 856 ntBASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 Z99916.2-201ENST00000604037 246 ntBASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 AC066615.1-201ENST00000640911 628 ntBASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 AL133373.2-201ENST00000623187 2828 ntBASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 FZD10-202ENST00000539839 3282 ntBASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CLK4Q9HAZ1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 AC026271.3-201ENST00000571884 352 ntBASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 AC131212.4-201ENST00000623606 975 ntBASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLK4Q9HAZ1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 KRT16P1-201ENST00000399124 1418 ntBASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.35■□□□□ 0.53
CLK4Q9HAZ1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms