Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 AC139887.4-201ENST00000607877 719 ntBASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 AC011298.2-201ENST00000617989 482 ntBASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1BQ9H9Y6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 KRT16P6-202ENST00000425692 1426 ntBASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 AL031133.1-201ENST00000406807 723 ntBASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 AL138966.2-201ENST00000621997 464 ntBASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 RCC2P6-201ENST00000526625 1557 ntBASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1BQ9H9Y6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 AC004951.3-201ENST00000418645 1148 ntBASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 SLC25A1P2-201ENST00000430693 912 ntBASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 AC092647.4-201ENST00000457211 535 ntBASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms