Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.51■□□□□ 0.71
BRD9Q9H8M2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 GPAT2P1-201ENST00000444924 1672 ntBASIC19.5■□□□□ 0.71
BRD9Q9H8M2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 BX276092.5-203ENST00000456199 560 ntBASIC19.5■□□□□ 0.71
BRD9Q9H8M2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 AL121672.3-201ENST00000608644 468 ntBASIC19.5■□□□□ 0.71
BRD9Q9H8M2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRD9Q9H8M2 AC125437.2-201ENST00000625180 2167 ntBASIC19.5■□□□□ 0.71
BRD9Q9H8M2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 TSSC2-201ENST00000450217 709 ntBASIC19.49■□□□□ 0.71
BRD9Q9H8M2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 AC011498.5-201ENST00000592027 486 ntBASIC19.49■□□□□ 0.71
BRD9Q9H8M2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 AC036111.1-201ENST00000533973 1582 ntBASIC19.49■□□□□ 0.71
BRD9Q9H8M2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRD9Q9H8M2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRD9Q9H8M2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BRD9Q9H8M2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRD9Q9H8M2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRD9Q9H8M2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRD9Q9H8M2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRD9Q9H8M2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRD9Q9H8M2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRD9Q9H8M2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRD9Q9H8M2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.47■□□□□ 0.71
BRD9Q9H8M2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms