Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 AL121956.5-201ENST00000625261 221 ntBASIC20.41■□□□□ 0.86
NXF3Q9H4D5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 AC091076.1-201ENST00000610741 619 ntBASIC20.4■□□□□ 0.86
NXF3Q9H4D5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.4■□□□□ 0.86
NXF3Q9H4D5 AC083849.1-201ENST00000615227 514 ntBASIC20.4■□□□□ 0.86
NXF3Q9H4D5 HYMAI.1-201ENST00000620949 238 ntBASIC20.4■□□□□ 0.86
NXF3Q9H4D5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
NXF3Q9H4D5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NXF3Q9H4D5 AL109659.2-201ENST00000606809 1674 ntBASIC20.39■□□□□ 0.86
NXF3Q9H4D5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NXF3Q9H4D5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 PCED1CP-201ENST00000419887 785 ntBASIC20.38■□□□□ 0.85
NXF3Q9H4D5 UPK3BP1-201ENST00000428678 509 ntBASIC20.38■□□□□ 0.85
NXF3Q9H4D5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NXF3Q9H4D5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 KRT8P32-201ENST00000512863 1461 ntBASIC20.37■□□□□ 0.85
NXF3Q9H4D5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 AC005332.1-201ENST00000577698 1310 ntBASIC20.37■□□□□ 0.85
NXF3Q9H4D5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 AP000550.4-202ENST00000639755 178 ntBASIC20.37■□□□□ 0.85
NXF3Q9H4D5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.37■□□□□ 0.85
NXF3Q9H4D5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NXF3Q9H4D5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms