Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
RNF38Q9H0F5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF38Q9H0F5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RNF38Q9H0F5 AL512353.2-201ENST00000448759 1962 ntBASIC19.58■□□□□ 0.73
RNF38Q9H0F5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF38Q9H0F5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 AC112907.2-201ENST00000448639 330 ntBASIC19.58■□□□□ 0.72
RNF38Q9H0F5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 MIR3180-5-201ENST00000583743 153 ntBASIC19.58■□□□□ 0.72
RNF38Q9H0F5 AL121956.5-201ENST00000625261 221 ntBASIC19.58■□□□□ 0.72
RNF38Q9H0F5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 AL032819.2-201ENST00000624543 2162 ntBASIC19.58■□□□□ 0.72
RNF38Q9H0F5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF38Q9H0F5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 SPDYE15P-201ENST00000424157 909 ntBASIC19.57■□□□□ 0.72
RNF38Q9H0F5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 AC091076.1-201ENST00000610741 619 ntBASIC19.57■□□□□ 0.72
RNF38Q9H0F5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF38Q9H0F5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 PCED1CP-201ENST00000419887 785 ntBASIC19.56■□□□□ 0.72
RNF38Q9H0F5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 AC024243.1-201ENST00000609234 778 ntBASIC19.56■□□□□ 0.72
RNF38Q9H0F5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF38Q9H0F5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 AC008556.1-201ENST00000610908 2040 ntBASIC19.55■□□□□ 0.72
RNF38Q9H0F5 AC083849.1-201ENST00000615227 514 ntBASIC19.55■□□□□ 0.72
RNF38Q9H0F5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 FP475955.4-201ENST00000623131 1990 ntBASIC19.55■□□□□ 0.72
RNF38Q9H0F5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 RCC2P3-201ENST00000418112 1537 ntBASIC19.55■□□□□ 0.72
RNF38Q9H0F5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF38Q9H0F5 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.54■□□□□ 0.72
RNF38Q9H0F5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RNF38Q9H0F5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms