Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPBQ9H078 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.98■□□□□ 0.63
CLPBQ9H078 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.98■□□□□ 0.63
CLPBQ9H078 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.98■□□□□ 0.63
CLPBQ9H078 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPBQ9H078 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPBQ9H078 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CLPBQ9H078 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPBQ9H078 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPBQ9H078 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLPBQ9H078 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLPBQ9H078 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.98■□□□□ 0.63
CLPBQ9H078 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.97■□□□□ 0.63
CLPBQ9H078 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.97■□□□□ 0.63
CLPBQ9H078 BX323043.1-201ENST00000641006 1765 ntBASIC18.97■□□□□ 0.63
CLPBQ9H078 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.97■□□□□ 0.63
CLPBQ9H078 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.97■□□□□ 0.63
CLPBQ9H078 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.97■□□□□ 0.63
CLPBQ9H078 FAM87A-204ENST00000613235 858 ntBASIC18.97■□□□□ 0.63
CLPBQ9H078 AL161938.1-201ENST00000569833 2180 ntBASIC18.97■□□□□ 0.63
CLPBQ9H078 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.97■□□□□ 0.63
CLPBQ9H078 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLPBQ9H078 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLPBQ9H078 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLPBQ9H078 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CLPBQ9H078 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.97■□□□□ 0.63
CLPBQ9H078 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLPBQ9H078 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.97■□□□□ 0.63
CLPBQ9H078 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPBQ9H078 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLPBQ9H078 KRT8P41-201ENST00000533985 1514 ntBASIC18.96■□□□□ 0.63
CLPBQ9H078 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLPBQ9H078 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLPBQ9H078 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 AL590326.2-201ENST00000625139 305 ntBASIC18.96■□□□□ 0.63
CLPBQ9H078 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLPBQ9H078 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPBQ9H078 AC087289.5-201ENST00000586076 3175 ntBASIC18.96■□□□□ 0.63
CLPBQ9H078 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLPBQ9H078 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPBQ9H078 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLPBQ9H078 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLPBQ9H078 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.96■□□□□ 0.63
CLPBQ9H078 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLPBQ9H078 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.95■□□□□ 0.62
CLPBQ9H078 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
CLPBQ9H078 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLPBQ9H078 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.95■□□□□ 0.62
CLPBQ9H078 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.95■□□□□ 0.62
CLPBQ9H078 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CLPBQ9H078 AP000974.1-201ENST00000623909 2387 ntBASIC18.95■□□□□ 0.62
CLPBQ9H078 ARMC10P1-201ENST00000313754 855 ntBASIC18.95■□□□□ 0.62
CLPBQ9H078 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.95■□□□□ 0.62
CLPBQ9H078 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.95■□□□□ 0.62
CLPBQ9H078 AC128688.1-201ENST00000487626 519 ntBASIC18.95■□□□□ 0.62
CLPBQ9H078 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.95■□□□□ 0.62
CLPBQ9H078 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CLPBQ9H078 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.95■□□□□ 0.62
CLPBQ9H078 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.95■□□□□ 0.62
CLPBQ9H078 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLPBQ9H078 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLPBQ9H078 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.95■□□□□ 0.62
CLPBQ9H078 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.95■□□□□ 0.62
CLPBQ9H078 FP475955.4-201ENST00000623131 1990 ntBASIC18.95■□□□□ 0.62
CLPBQ9H078 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CLPBQ9H078 IRX1P1-201ENST00000438849 1838 ntBASIC18.95■□□□□ 0.62
CLPBQ9H078 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLPBQ9H078 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
CLPBQ9H078 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLPBQ9H078 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms