Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 AL138781.1-201ENST00000566567 1274 ntBASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.17■□□□□ 0.66
PHACTR1Q9C0D0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 POU5F1P3-201ENST00000428824 1078 ntBASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 AC004264.1-201ENST00000608354 794 ntBASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 LTB4R2-202ENST00000528054 3092 ntBASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 NBPF21P-201ENST00000425093 1451 ntBASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHACTR1Q9C0D0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 KRT8P32-201ENST00000512863 1461 ntBASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.15■□□□□ 0.66
PHACTR1Q9C0D0 AC068880.1-201ENST00000507289 2297 ntBASIC19.14■□□□□ 0.66
PHACTR1Q9C0D0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PHACTR1Q9C0D0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PHACTR1Q9C0D0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.14■□□□□ 0.66
PHACTR1Q9C0D0 AC106820.2-201ENST00000563775 3264 ntBASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.14■□□□□ 0.65
PHACTR1Q9C0D0 AL109923.1-201ENST00000618799 583 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms