Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM4Q9C037 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM4Q9C037 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM4Q9C037 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM4Q9C037 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 KRT18P68-201ENST00000392293 1000 ntBASIC18.82■□□□□ 0.6
TRIM4Q9C037 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM4Q9C037 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM4Q9C037 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM4Q9C037 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM4Q9C037 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM4Q9C037 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 AL353708.3-201ENST00000610272 989 ntBASIC18.81■□□□□ 0.6
TRIM4Q9C037 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM4Q9C037 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM4Q9C037 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM4Q9C037 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM4Q9C037 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM4Q9C037 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM4Q9C037 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM4Q9C037 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM4Q9C037 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM4Q9C037 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM4Q9C037 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM4Q9C037 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.79■□□□□ 0.6
TRIM4Q9C037 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms