Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RTFDC1Q9BY42 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 FOSL1P1-201ENST00000511041 816 ntBASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
RTFDC1Q9BY42 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 Z83836.1-201ENST00000624605 1642 ntBASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 AC010240.3-201ENST00000607688 395 ntBASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
RTFDC1Q9BY42 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 AP002469.2-201ENST00000531724 424 ntBASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 AC090616.6-201ENST00000582640 721 ntBASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 AL390719.2-201ENST00000606993 987 ntBASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RTFDC1Q9BY42 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 KRT18P23-201ENST00000435622 1283 ntBASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 SLC25A6P4-201ENST00000586535 553 ntBASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 AC005332.3-201ENST00000589904 676 ntBASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 AC004263.2-201ENST00000617183 678 ntBASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.92■■□□□ 1.26
RTFDC1Q9BY42 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
RTFDC1Q9BY42 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms